Linux command line exercises for NGS data processing
The purpose of this tutorial is to introduce students to the frequently used tools for NGS analysis as well as giving ex...and do all the processing inside: [uzi@quince-srv2 ~/]$ cp -r /home/opt/MScBioinforma...2888 days ago
2881 days ago
Bioinformatics tools and software
USEARCH >Extreme high-throughput sequence analysis. Orders of magnitude faster than BLAST. MUSCLE >Multiple sequence alignment. Faster and more accurate than C...2875 days ago
Fancy Oneliner for Bioinformatics !!
This webpage lists some of the one-liners that we frequently use in metagenomic analyses. You can click on the following links to browse through different topics. You can...2873 days ago
2641 days ago
GeneValidator - Identify problems with predicted genes
GeneValidator helps in identifing problems with gene predictions and provide useful information extracted from an...idator: identify problems with protein-coding gene predictions. Bioinformatics, doi: 10.1093/bioinforma...2823 days ago
2820 days ago
2811 days ago
Entrez Direct: E-utilities on the UNIX Command Line
Entrez Direct (EDirect) is an advanced method for accessing the NCBI's suite of interconne...window. Functions take search terms from command-line arguments. Individual operations are combined to build multi-s...2769 days ago
2753 days ago