Comment on "Setting up autoConTAMPR !"
...(0.0.20121010-1) ...Setting up t-coffee (10.00.r1613-1) ...Setting up tigr-glimmer (3.02-3) ...Setting up tm-align (20130511+dfsg-1) ...Setting up bowtie (1.0.0-5) ...Setting up hmmer...1438 days ago
Comment on "Commercial and public next-gen-seq (NGS) software"
...tp://maq.sourceforge.net/maq-man.shtmlSOAP alignment tool: http://soap.genomics.org.cn/SeqMaq: http://biogibbs.stanford.edu/~jiangh/SeqMap/Bowtie: http://bowtie-bio.sourceforge.net/Novoalign...3618 days ago
Comment on "List of popular bioinformatics software/tools"
TopHat http://tophat.cbcb.umd.edu/manual.shtml is a program that aligns RNA-Seq reads to a genome in order to identify exon-exon splice junctions. It is built on the ultrafast short read mapping program Bowtie.3644 days ago