Cerulean: A hybrid assembly using high throughput short and long reads
Cerulean extends contigs assembled using short read dataset...ads using long reads like PacBio RS long reads. Cerulean v0.1 has been implemented wit...V., Fung, E. D., Pham, S., & Bafna, V. (2013). Cerulean: A hybrid assembly using high...2165 days ago
Evaluation of genome assembly software based on long reads
...oftware that have been evaluated are: Celera Assembler , Falcon , Miniasm, Newbler , SGA Assembler, Smartdenovo, Abruijn, Ra, DBG2OLC, Spades and Cerulean. The first 8 software use onl...1924 days ago
Genome Assembly Tools and Software - PART1 !!
...th Phred-Phrap and fully supports sequence quality scores, while offering a familiar, easy-to-learn user interface. Cerulean 0.1.1 – Hybrid Genome Assembler Cerulean is a hybrid assembly using hi...2689 days ago
Cerulean: A hybrid assembly using high throughput short and long reads
Cerulean extends contigs assembled using short read datasets like Illumina paired-end reads using long reads like PacBio RS long reads. Cerulean v0.1 has been implemented with bacterial genomes in mind. The method is fully described in Deshpande, V., Fung, E. D., Pham, S., & Bafna, V. (...Tags: Cerulean, hybrid, assembly, short, long, reads, pacbio, nanopore
2165 days ago