Results for "ChIP-seq"
Top-level pages
Bioinformatics Courses Around the World
Bioinformatics Courses around the world Here is the list Bioinformatics courses offered around the world. Reasons for constructing this page are: To show the extent...3947 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...21:2224-2241, 2011 Full Text Chromatin immunoprecipation analysis: ChIP-seq ChIP-seq: advantages and challenges of...ver-representation of specific ontology categories among genes near ChIP-seq peaks Next-gen-seq software...3783 days ago
List of bioinformatics open source projects/software.
...ttp://www.geneprof.org/GeneProf/ A web-based, bioinformatics software suite for the analysis of functional genomics experiments, e.g. RNA-seq or ChIP-seq. GeneTalk http://www.gene-t...3761 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
List of generic simulation software/tools/resource with brief description and homepage ALF A Simulation Framework for Genome Evolution http://www.cbrg.ethz.ch/alfBaye...3741 days ago
Next generation sequencing in R or bioconductor environment
...n a large number of enriched regions from high-throughput ChIP-chip or ChIP-seq experiments, but it can be ap...de will be adversely affected by updates to these data. Documentation ChIP-Seq Analysis Packages Bioconduct...3629 days ago
Commercial and public next-gen-seq (NGS) software
...oftware. Includes SNP detection, CHiP-seq, browser and other features....ssembly. Includes SNP detection, CHiP-seq, browser and other features....hon/Win or Linux. Counting e.g. CHiP-Seq, Bis-Seq, CNV-Seq BS-Seq - Th...- PeakSeq: Systematic Scoring of ChIP-Seq Experiments Relative to Contr...3523 days ago
Software packages for next gen sequence analysis
...oftware. Includes SNP detection, CHiP-seq, browser and other features....ssembly. Includes SNP detection, CHiP-seq, browser and other features....hon/Win or Linux. Counting e.g. CHiP-Seq, Bis-Seq, CNV-Seq * BS-Seq -...- PeakSeq: Systematic Scoring of ChIP-Seq Experiments Relative to Contr...3246 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...ing alignment, RNA-Seq, DNA-Seq, ChIP-Seq, Small RNA-Seq, Genome Browse...bly, variant detection, RNA-Seq, ChIP-Seq, Genome Browser, etc (entire..., variant analysis, and RNA-Seq, ChIP-Seq and miRNA alignment and analy...ows include: RNA-Seq, miRNA-Seq, ChIP-Seq, DNA-Seq, and Methylation Po...2913 days ago
Genome Assembly Tools and Software - PART1 !!
The genome assemblers generally take a file of short sequence reads and a file of quality-value as the input. Since the quality-value file for the high throughput short...2690 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
kallisto Transcript abundance quantification from RNA-seq data (uses pseudoalignment for rapid determination of read compatibility with targets) Software (C++)...2375 days ago
