Results for "ChIP-seq"
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Comment on "Commercial and public next-gen-seq (NGS) software"
HiChIP: a high-throughput pipeline for integrative analysis of ChIP-Seq data http://www.biomedcentral.com/1471-2105/15/280/abstract3551 days ago
Comment on "Next generation sequencing in R or bioconductor environment"
R package SPP for chip-seq analysis. It can read quite a few aligner's output file. Here is the original package tutorial. http://compbio.med.harvard.edu/Supplements/ChIP-seq/tutorial.htmlHere is my versi...3626 days ago
Comment on "R and Bioconductor Tutorial"
...– interface to BioMart annotations. rtracklayer – interface to online and other genome browsers. chipseq & ChIPpeakAnno – Chip-Seq More at https://rc.fas.har...3674 days ago
Comment on "PLOS Computational Biology: Translational Bioinformatics educational resources"
Practical Guidelines for the Comprehensive Analysis of ChIP-seq Data http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.10033263818 days ago
Comment on "Next Generation Sequencing (NGS) Tutorials"
ANGUS is a site built around the 2010 course on Analyzing Next-Generation Sequencing Data. It contains a number of detailed tutorials on mapping, assembly, mRNAseq, ChIP-seq, and resequencing analysis. Enjoy! http://ged.msu.edu/angus/index.html3909 days ago
