Edit distance application in bioinformatics !
There are other popular measures of edit distance, which are calculated using a...eveloped to measure the similarity of two different populations in ecological research.2355 days ago
Bioinformatics Web Application Development with Perl
Perl's second wave of adoption came from the growth of the world wide web. Dynamic w...ive ways, and the project has produced a lot of new code that does old things in bette...emove all but the most complicated of SQL from your code,...2335 days ago
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Linux Commands Cheat Sheet for Bioinformatics and Computational Biology Professionals
The purpose of this cheat sheet is to introduce biologist and bioinformat...f -i tcp:1337 — list all processes running on port 1337 Searching grep pattern files — search for pattern in files grep -r...2294 days ago
Awk for Bioinformatician and computational biologist
...y used for pattern scanning and processing. It searches one or more files to see...will be performed.In the above syntax, either search pattern or action are optiona...EXT : PRINT_IF_FALSE_TEXT. For example, in the code below, we identify sequences wi...2293 days ago
Computational resources for TE discovery and TE detection
Transposable Elements (TEs) to genome structure and evol...est.html TRANSPO http://alggen.lsi.upc.es/recerca/search/transpo/transpo.html TSDfinder http://www.ncbi.nlm.nih.gov/CBBresearch/Landsman/TSDfinder/ Tu Lab...2287 days ago
Python learning resources for bioinformatics and computational biologist !
Python is a general-purpose language, which means it can be used to build...e resources at https://github.com/CodementorIO/Python-Learning-Resou...ing Skills in Python (PDF) (2.6) Code Like a Pythonista: Idiomatic...on - David Mertz (2.3 - 2.x) The Coder'...2269 days ago
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Tools for Protein-Protein Docking !
Predicting the structure of protei...3D-Dock Suite Global rigid search: FFTShape complementarity and...ains 3D-Garden Global rigid search in ensamble Shape complement...GRAMM-X Global rigid search: FFT. smooth protein surface...mations PyDock Global rigid search:FFTShape complementarity res...2216 days ago