3908 days ago
3908 days ago
2873 days ago
BLAST Ring Image Generator (BRIG)
...ith a focus on handling genome assembly data. The application is available at: http://sourceforge.net/projects/brig If you have any questions or comments, post them on one of the trac...2774 days ago
2634 days ago
3d-dna: 3D de novo assembly (3D DNA) pipeline
...uicebox (Durand & Robinson et al., Cell Systems, 2016), as well as additional dependencies noted below. Feel free to post your questions and comments at: http://www.aidenlab....2319 days ago
mScaffolder: A comparative genome scaffolding tool
...nd then orders and orients the contigs of the candidate genome guided by their alignments to the reference genome. Please send your questions and comments to mchakrab@uci.edu. Ci...2151 days ago
SWALO: Scaffolding with assembly likelihood optimization
SWALO (scaffolding with assembly likelihood optimization) is a method for scaffolding based on likelihood of genome assemblies computed using generative models for sequencing. Please email your questions, comments, suggestions, and bug reports to atif.bd@gmail.com.2146 days ago
plumber:An R package that converts your existing R code to a web API
plumber allows you to create a REST API by merely decorating your existing R source code with special comments. Take a look at an example. # plumber.R #* Echo back the input #* @p...1879 days ago
DISTRUCT: a program for the graphical display of population structure
...figure using the data that are represented in the Central/South Asia K=5 plot in Science 298: 2381-2385 (2002). Please send comments or problems with distruc...1868 days ago