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mScaffolder: A comparative genome scaffolding tool
By Jit 2351 days ago
https://github.com/mahulchak/mscaffolder
A comparative genome scaffolding tool based on MUMmer
mScaffolder scaffolds a genome using an existing high quality genome as the reference. It aligns the two genomes using nucmer utility from MUMmer and then orders and orients the contigs of the candidate genome guided by their alignments to the reference genome. Please send your questions and comments to mchakrab@uci.edu.
