3961 days ago
Useful Links for Bioinformaticians
...Terms Similarity Search Tutorials An Overview of Sequence Comparison Algorithms in Molecular Bill...tutorial Pedestrian guide to analysing sequence databases Sequence Comparison (Keith Robison) Database Res...3144 days ago
Best book Titles for Learning Bionformatics
...iro, Dennis Elliott Shasha (Editors), 1999, Oxford Univ Press Time Warps, String Edits, and Macromolecules: The Theory and Practice of Sequence Comparison, David Sankoff and Joseph Kru...3932 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...PubMedCentral Genome assembly has a major impact on gene content: a comparison of annotation in two Bos taur...Res 41:21–32, 2013 PubMed Transcriptome analysis Assembly and comparison to genome Full-length transc...3793 days ago
List of In-silico Binding Site Prediction Tools
...nd structures. To perform an effective shape comparison, we utilize the Smith-Waterma...und structures and 210 bound structures. The comparison results show that metaPocket...ed with their respective ligand complexes. A comparison of our method with four other...3758 days ago
Commercial and public next-gen-seq (NGS) software
...The SWIFT suit is a software collection for fast index-based sequence comparison. It contains the following pr...The SWIFT suit is a software collection for fast index-based sequence comparison. It contains: SWIFT — f...3533 days ago
Software packages for next gen sequence analysis
...thors are Ondov B, Varadarajan A, Passalacqua KD and Bergman NH. * SWIFT - The SWIFT suit is a software collection for fast index-based sequence comparison. It contains: SWIFT — f...3257 days ago
Genome Assembly Tools and Software - PART1 !!
...ts multiple assemblies, thus is suitable for comparison. DNA Baser 4.36 &ndash...opular assemblers, and can perform automated comparison and analysis of any generated...s, without the use of a reference genome for comparison. It can be used in any stage...2700 days ago
Perl Special Vars Quick Reference
$_ The default or implicit variable. @_ Subroutine parameters. $a$b sort comparison routine variables. @ARGV The command-line args. Regular Expression...2658 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
...nomy to sequencing reads from clinical and environmental samples Web service http://taxonomer.iobio.io/ Other d2-tools Word-based (k-tuple) comparison (pairwise dissimilarity matri...2385 days ago