Results for "Computational Systems Biology"

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  • CSBB-v1.0

    CSBB is a command line based bioinformatics suite to analyze biological data acquired...in background for specific modules. Major focus of CSBB is to allow users from biology and bioinformatics community,...

    2882 days ago

  • RepeatModeler

    RepeatModeler is a de-novo repeat family identification and modeling package. At the heart of...de-novo repeat finding programs ( RECON and RepeatScout ) which employ complementary computa...

    2832 days ago

  • LUMPY

    A probabilistic framework for structural variant discovery. Ryan M Layer, Colby Chian...4. "LUMPY: a Probabilistic Framework for Structural Variant Discovery." Genome Biology 15 (6): R84. doi:10.1186...

    2825 days ago

  • Method in Comparative genomics !!

    We present methods for the automatic determination of genome correspondence. The algorithms e...ious knowledge of gene function and in that way differ from the current literature on computa...

    2749 days ago

  • OPERA : Optimal Paired-End Read Assembler

    OPERA (Optimal Paired-End Read Assembler) is a sequence assembly program (http://en.wi...uscript describing the new features and algorithms is available at Genome Biology. We look forward to getting y...

    2810 days ago

  • CGView - Circular Genome Viewer

    GView is a Java package used to display and navigate bacterial genomes. GView is useful for producing high-quality genome maps for use in publications and websites, or...

    2800 days ago

  • GeneBreak: a tool to systematically identify genes recurrently affected by the genomic location of chromosomal CNA-associated breaks by a genome-wide approach

    Development of cancer is driven by somatic alterations, including numerical and structural chromosomal aberrations. Currently, several computa...l segments in tumor genomes. However, there is lack of computa...

    2169 days ago

  • Shinyheatmap

    Background: Transcriptomics, metabolomics, metagenomics, and other various next-generat...big data has posed technical challenges in biology, both in terms of available computa...input datasets (e.g., 100k+ rows) has been computationally infeasible on both de...

    2768 days ago

  • Graph Genome Suite

    Seven Bridges is the biomedical data analysis company accelerating breakthroughs in genomics research for cancer, drug development and precision medicine. We build self-improving systems...

    2761 days ago

  • Spines

    Spines is a collection of software tools, developed and used by the Vertebrate Genome Biology Group at the Broad Institute....

    2730 days ago