Results for "Computational Tools"

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  • Greengenes database

    The greengenes web application provides access to the 2011 version of the greengenes 16S rR...ence alignment for browsing, blasting, probing, and downloading. The data and tools presented by greengenes can a...

    2861 days ago

  • Bioinformatics tools and software

    USEARCH >Extreme high-throughput sequence analysis. Orders of magnitude faster than BLAST. MUSCLE >Multiple sequence alignment. Faster and more accurate tha...

    2855 days ago

  • MEGAN6

    Microbiome analysis using a single application MEGAN6 is a comp...ely analyzing microbiome data. All the interactive tools you need in one application....rehensive. MEGAN6 offers a large range of analysis tools, and is under active developm...

    2835 days ago

  • Genome STRiP

    Genome STRiP (Genome STRucture In Populations) is a suite of tools for discovering and genotyping structural variations using sequencing data. The methods are designed to detect shared variation...

    2792 days ago

  • Understanding PacBio

    This tutorial includes resources for learning more about PacBio data and bioinformatics ana...Transcriptome analysis Base Modification Analysis Barcoding Data Analysis Tools Minor Variants and Phasing A...

    2621 days ago

  • RepeatModeler

    RepeatModeler is a de-novo repeat family identification and modeling package. At the heart of RepeatModeler are two de-no...repeat finding programs ( RECON and RepeatScout ) which employ complementary compu...

    2811 days ago

  • vcfR

    Most variant calling pipelines result in files containing large quantities of variant infor...e false positives or otherwise problematic sites. The R package vcfR provides tools to facilitate this filtering...

    2810 days ago

  • Useful Bioinformatics Tools

    Collections of few handy tools for bioinformatician http://molbiol-tools.ca/Convert.htm

    2800 days ago

  • Method in Comparative genomics !!

    We present methods for the automatic determination of genome correspondence. The algorithms enabled the automatic identif...wledge of gene function and in that way differ from the current literature on compu...

    2728 days ago

  • BRAKER: pipeline for fully automated prediction of protein coding genes with GeneMark-ES/ET and AUGUSTUS in novel eukaryotic genomes

    Gene finding in eukaryotic genomes is notoriously difficult to automate. The task is to design a work flow with a minimal set of tools that would reach state-of-the...

    1945 days ago