Convenient conversions between genome assemblie. The liftover package makes it easy to remap genomic coordinates to a different genome assembly.
More at https://github.com/aaronwolen/liftover
https://www.bioconductor.org/help/workflows/liftOver/
NCBI Remap. This tool is conceptually similar to liftOver in that in manages conversions between a pair of genome assemblies but it uses different methods to achieve these mappings. It...
...CII files using sprintf("%a") for double/complex quantities. This is read-compatible with ascii = TRUE but avoids binary->decimal->binary conversions with potential loss of precis...
...in Perl/Python/R
Remuneration : Rs. 20,000/- per month (consolidated)
Scope of work :
1. Analysis of different file formats and their conversions.
2. Assessing the quality...
#GffRead: GFF/GTF utility providing format conversions, filtering, FASTA sequence extraction and more.
https://github.com/gpertea/gffread
(jitENV) jitendra@Bathymodiolus:~$ conda in...
Database to Database Conversions
db2db allows for conversions of identifiers from one database to other database identifiers or annotations. To use db2db select the input type of your data, changing the input type automatically changes the output options to the ones specific for the input selec...
Tags: Bioinformatics, Database, Conversions, BioDBnet, GO