BBTools for bioinformatician !
...---------------Reformat.sh Count k-mers/find unknown primers...t That stands for "quality count histogram". Filter S...ch it maps).NOTE: 3 Zero-count lines are suppressed by defau...in=reads.fq out=kmers.txt k=4 count=t display=999 Will produce...2263 days ago
Basic command-line to run BLAST
...in each one? grep -c '^>' cow.1.protein.faa grep -c '^>' human.1.protein.faa This grep command uses the c flag, which reports a count of lines with match to the pa...2237 days ago
Install ImageMagick from Unix Source
....com/ImageMagick/ImageMagick.git []Cloning into 'ImageMagick'...remote: Counting objects: 124593, done.remo...g dd... /bin/ddchecking how to truncate binary pipes... /bin/dd bs=4096 count=1checking for mt... mtcheckin...2139 days ago
1828 days ago
Bioinformatics tools for telomere to telomere assembly !
...bsp;PanGenie – algorithm that leverages a pangenome reference built from haplotype-resolved genome assemblies in conjunction with k-mer count information from raw, short-r...984 days ago