Results for "Count"

Blogs

  • BBTools for bioinformatician !

    ...---------------Reformat.sh Count k-mers/find unknown primers...t That stands for "quality count histogram".  Filter S...ch it maps).NOTE: 3 Zero-count lines are suppressed by defau...in=reads.fq out=kmers.txt k=4 count=t display=999 Will produce...

    2263 days ago

  • Basic command-line to run BLAST

    ...in each one? grep -c '^>' cow.1.protein.faa grep -c '^>' human.1.protein.faa This grep command uses the c flag, which reports a count of lines with match to the pa...

    2237 days ago

  • Install ImageMagick from Unix Source

    ....com/ImageMagick/ImageMagick.git []Cloning into 'ImageMagick'...remote: Counting objects: 124593, done.remo...g dd... /bin/ddchecking how to truncate binary pipes... /bin/dd bs=4096 count=1checking for mt... mtcheckin...

    2139 days ago

  • AWK for beginners !

    ...he FS delimiter, # which defaults to white-space (multiple spaces,tabs count as one) # You can assign FS...iables are global. Just set them or use them, no need to declare.. count = 0; # Operators just...

    1828 days ago

  • Bioinformatics tools for telomere to telomere assembly !

    ...bsp;PanGenie – algorithm that leverages a pangenome reference built from haplotype-resolved genome assemblies in conjunction with k-mer count information from raw, short-r...

    984 days ago