Results for "Cutadapt"
Blogs
Illumina based assembly pipeline steps !
...variant screenshots with annotation tracks (ASCIIGenome) Intersect variants across callers (BCFTools) De novo assembly Primer trimming (Cutadapt; amplicon data only) Choice...878 days ago
Bookmarks
- Cutadapt finds and removes adapter sequences, primers, poly...en you don’t want them to be in your reads. Cutadapt helps with these trimming tas...data, without removing adapter sequences at all. Cutadapt comes with an extensive suite...
2915 days ago
- Cutadapt finds and removes adapter sequences,...r high-throughput sequencing reads. Cutadapt helps with these trimming tas...removing adapter sequences at all. Cutadapt comes with an extensive suite...e at https://github.com/marcelm/cutadapt
2700 days ago
Tags
- Cutadapt finds and removes adapter sequences, primers, poly-A tails and other types of unwanted sequence from your high-throughput sequencing reads. Cleaning your data in this way is often required: Reads from small-RNA sequencing contain the 3’ sequencing adapter because the read is longe...
Tags: Bioinformatics, Cutadapt, NGS, Reads, Fastq, Sequencing
2915 days ago
- Cutadapt finds and removes adapter sequences, primers, poly-A tails and other types of unwanted sequence from your high-throughput sequencing reads. Cutadapt helps with these trimming tasks by finding the adapter or primer sequences in an error-tolerant way. It can also modify and filter reads i...
Tags: Bioinformatics, Analysis, Assembly, NGS, Cutadapt
2700 days ago
Comments
Comment on "Software packages for next gen sequence analysis"
Thanks for the useful list. I found this CUTADAPT useful. It searches for the adapter in all reads and removes it when it finds it.http://cutadapt.readthedocs.org/en/stable/guide.html3066 days ago
