Results for "DNA Barcoding"

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  • Artemis Comparison Tool (ACT)

    ACT is a Java application for displaying pairwise comparisons between two or more DNA sequences. It can be used to identify and analyse regions of similarity and difference between genomes and to...

    2795 days ago

  • FERMI

    Fermi is a de novo assembler with a particular focus on assembling Illumina short sequence reads from a mam...raw reads.Fermi follows the overlap-layout-consensus paradigm and uses the FM-DNA-index...

    2793 days ago

  • DECIPHER

    DECIPHER is a software toolset that can be used to maintain, analyze, and decipher large amounts of DNA seque...

    2771 days ago

  • Murasaki

    Murasaki is an anchor alignment program that is exteremely fast (17 CPU hours for whole Human x Mouse genome (with 40 nodes: 35 wall minutes), or 8 mammals in 21 CPU...

    2771 days ago

  • GeneBreak: a tool to systematically identify genes recurrently affected by the genomic location of chromosomal CNA-associated breaks by a genome-wide approach

    Development of cancer is driven by somatic alterations, including numerical and structural chromosomal aberratio...somal CNA-associated breaks by a genome-wide approach, which can be applied to DNA copy...

    2151 days ago

  • PHYMMBL

    Metagenomics sequencing projects collect samples of DNA from uncharacterized environments that may contain hundreds or even thous...ta which uses interpolated Markov models (IMMs) to taxonomically classify DNA seque...

    2761 days ago

  • HybPiper

    HybPiper was designed for targeted sequence capture, in which DNA sequencing libraries are enriched for gene regions of interest, especi...matics tools in order to extract target sequences from high-throughput DNA seque...

    2737 days ago

  • SGA: String Graph Assembler

    SGA is a de novo genome assembler based on the concept of string graphs. The major goal of SGA is to be very memory efficient, which is achieved by using a compressed representation of DNA seque...

    2703 days ago

  • EAGER

    The automated reconstruction of genome sequences in ancient genome analysis is a multifaceted process. EAGER en...rt tools for each step as well as new complementary tools tailored for ancient DNA data...

    2700 days ago

  • LAST

    LAST can: Handle big sequence data, e.g: Compare two vertebrate genomes Align billions of DNA reads to a genome Indica...Use sequence quality data properly. Compare DNA to pr...

    2691 days ago