List of bioinformatics open source projects/software.
Open source software is software that can be freely used, changed, and shared (in modified or unmodified form) b...ENtle An equivalent to the proprietary Vector NTI, a tool to analyze and edit DNA seque...3752 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
List of generic simulation software/tools/resource with brief descriptio...simulate the evolution of recombinant DNA sequences in continuous time...rogram that simulates highly divergent DNA sequences and protein superfa...lMySSP A program for the simulation of DNA seque...3732 days ago
List of In-silico Binding Site Prediction Tools
Following are the list of In-silico Binding Site Prediction in Proteins tools CASTp : http://sts.bioengr.uic.ed...tection of protein–protein, protein–small ligand and protein–DNA bindi...3739 days ago
Next generation sequencing in R or bioconductor environment
There are many R software and bioconductor packages for NGS dat...to search a set of unaligned DNA sequences for a shared motif...ns as input and outputs short DNA sequences that are overrepres...lling package for identifying DNA binding sites of proteins in...TopHat SpliceMap SplitSeek DNA-Methy...3619 days ago
Commercial and public next-gen-seq (NGS) software
Integrated solutions CLCbio Genomics Workbench - de novo and re...flows for: ChIP-Seq, RNA-Seq, DNA-Seq, DNA Methylation, Gene Expression,...read aligner. It aligns short DNA sequences (reads) to the huma...finding near exact matches in DNA or protein databases using a...he Arabidopsis Genome Reveals DNA Methy...3514 days ago
Apps for Busy Bioinformatics Researchers !!!
DNAApp: DNAApp: for iPhone/iPad This is an iOS app that allows for the opening and analysis of DNA sequencing files - ab1. It in...More @ https://itunes.apple.com/us/app/dnaapp/id854944694?mt=8 DNAApp:...allows for the opening and analysis of DNA seque...3536 days ago
List of Biotechnology Research Laboratory, University, and Centre in India
DEPARTMENT OF BIOTECHNOLOGY Centre For DNA Fingerprinting And Diagnostics (CDFD), Hyderabad ( Institute of Bioresources and Sustainable Development (IBSD), Imphal,...2566 days ago
Software packages for next gen sequence analysis
Integrated solutions * CLCbio Genomics Workbench - de novo and...d analysis pipeline for short DNA sequences produced on a Illum...read aligner. It aligns short DNA sequences (reads) to the huma...finding near exact matches in DNA or protein databases using a...erfect 3'-most k-mers using a DNA prefi...3237 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
Commercial tools Strand NGS offers many different tools including alignment, RNA-Seq, DNA-Seq, ChIP-Seq, Small RNA-Seq,...lications (RNA-Seq, ChIP-Seq, DNA-Seq, etc.) Very fast - get a...RADIA Description: RNA and DNA Integrated Analysis for Somat...signal, predicted algorithm, cDNA posit...2904 days ago
Tools for Searching Repeats And Palindromic Sequences
What are genomic interspersed repeats? In the mid 1960's scien...uplications of simple sets of DNA bases (typically 1-5bp) such...ce of a reverse transcriptase.DNA TransposonsRetrovirus Retrotr...nscription by RNA polymerase, DNA strands have upstream and dow...ucleases) designed to cut the DNA stran...2206 days ago