Results for "DNA Codes"
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Kraken: ultrafast metagenomic sequence classification using exact alignments
Kraken is an ultrafast and highly accurate program for assigning taxonomic labels to metagenomic DNA s...2868 days ago
Fancy Oneliner for Bioinformatics !!
This webpage lists some of the one-liners that we frequently use in metagenomic ana...same naming conventions and folder structures as we have. We are sharing these codes with the intention that if th...2858 days ago
- ACT is a Java application for displaying pairwise comparisons between two or more DNA sequences. It can be used to identify and analyse regions of similarity and difference between genomes and...
2796 days ago
- Fermi is a de novo assembler with a particular focus on assembling Illumina short sequence reads from a mamm...n raw reads.Fermi follows the overlap-layout-consensus paradigm and uses the FM-DNA-i...
2794 days ago
- DECIPHER is a software toolset that can be used to maintain, analyze, and decipher large amounts of DNA s...
2773 days ago
- Murasaki is an anchor alignment program that is exteremely fast (17 CPU hours for whole Human x Mouse genome (with 40 nodes: 35 wall minutes), or 8 mammals in 21 CP...
2773 days ago
- Development of cancer is driven by somatic alterations, including numerical and structural chromosomal aberration...osomal CNA-associated breaks by a genome-wide approach, which can be applied to DNA c...
2153 days ago
- Metagenomics sequencing projects collect samples of DNA from uncharacterized environments that may contain hundreds or even thousa...ata which uses interpolated Markov models (IMMs) to taxonomically classify DNA s...
2763 days ago
- HybPiper was designed for targeted sequence capture, in which DNA sequencing libraries are enriched for gene regions of interest, especia...rmatics tools in order to extract target sequences from high-throughput DNA s...
2738 days ago
- The blog is a collection of script examples with example data and output plots. R produce excellent quality graphs for data analysis, science and business presentation, publications and other purposes. Self-help codes and examples are provided. Enjoy nice graphs !!
2738 days ago
