Results for "DNA sequencing"
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Algorithms for DNA Sequencing (course offered each month)
...algorithms and data structures -- for analyzing DNA sequencing data. We will learn a little about DNA, genomics, and how DNA sequencing is used. We will use Python t...data structures and to analyze real genomes and DNA sequencing datasets." Source : htt...3199 days ago
Barrnap: Bacterial ribosomal RNA predictor
Barrnap predicts the location of ribosomal RNA genes in genomes. It supports bacteria...) and eukaryotes (5S,5.8S,28S,18S). It takes FASTA DNA sequence as input, and write...that comes with HMMER 3.1 for HMM searching in RNA:DNA style....2543 days ago
Alignment of closely related whole genomes/scaffolds
With the relative ease and low cost of current generation sequencing technologies has led to a dramatic increase in the number of sequenced genomes for species across the tree of life. This increasin...3012 days ago
- Although centromeres are essential for life and are the subject of extensive resea...cation for a large number of yeast species, even with a limited amount of Hi-C sequencing. Paper:http://www.ncbi.nlm.n...
2998 days ago
- This software is designed to identify both simple and complex rearrangements from paired-end sequencing data. Users could ran it easi...
2981 days ago
Pattern Searching in a Single Genome
Pattern searching holds much importance for biologists , for the understanding of DNA ( and its functionality) can be more than a matter of satisfying curiosity , but also give answers to many iss...2974 days ago
- LAST can: Handle big sequence data, e.g: Compare two vertebrate genomes Align billions of DNA reads to a genome Indica...lumn. Use sequence quality data properly. Compare DNA to pro...
2972 days ago
- Picard is a set of command line tools for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BA...
2921 days ago
PAired-eND Assembler for DNA sequences
PANDASEQ is a program to align Illumina reads, optionally with PCR primers embedded in the sequence, and reconstruct an overlapping sequence. More at https://github.com/neufeld/pandaseq2944 days ago
- MIRA is a multi-pass DNA sequence data assembler/mapper for whole g...aps reads gained by electrophoresis sequencing (aka Sanger sequencing) 454 pyro-sequencing (GS...s). One can use the sequences of different sequencing technologies either in a sing...
2944 days ago
