Results for "DNA test"
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Kraken: ultrafast metagenomic sequence classification using exact alignments
...y accurate program for assigning taxonomic labels to metagenomic DNA sequences. Previous programs...rs, Kraken achieves classification accuracy comparable to the fastest BLAST program. In its fastest mode, Kraken classifies 100 b...2881 days ago
Method in Comparative genomics !!
We present methods for the automatic determination of ge...reading frame of functional proteins and developed a test for gene identification with high sensitivity and specificity. We used this test to revisit the genome of S. c...2745 days ago
- ACT is a Java application for displaying pairwise comparisons between two or more DNA sequences. It can be used to identify and analyse regions of similarity and difference between genomes and...
2809 days ago
- Redundans pipeline assists an assembly of heterozygous genomes.Program takes as input assembled contigs, paired-end and/or mate pairs sequencing librari...
2815 days ago
- Fermi is a de novo assembler with a particular focus on assembling Illumina short sequence reads from a mamm...n raw reads.Fermi follows the overlap-layout-consensus paradigm and uses the FM-DNA-...
2807 days ago
- DECIPHER is a software toolset that can be used to maintain, analyze, and decipher large amounts of DNA...
2786 days ago
- Murasaki is an anchor alignment program that is exteremely fast (17 CPU hours for whole Human x Mouse genome (with 40 nodes: 35 wall minutes), or 8 mammals in 21 CP...
2786 days ago
- ...CNA-associated breaks by a genome-wide approach, which can be applied to DNA copy number data obtained by...influence the probability to be a breakpoint gene. In addition, multiple testing correction is integrated t...
2166 days ago
- Metagenomics sequencing projects collect samples of DNA from uncharacterized environments that may contain hundreds or even thousa...ata which uses interpolated Markov models (IMMs) to taxonomically classify DNA...
2776 days ago
- Visualization has played an extremely important role in...tection of sequencing and sample preparation issues, testing of aligners and variant-ca...ers such as MUMmer. Therefore, Ribbon can be used to test assembly algorithms or inspec...
2765 days ago
