Results for "DU"
Top-level pages
...is. read-length: the number of base pairs that are sequenced in an individual sequence read. read-depth:...hroughput sequencing method which parallelizes the sequencing process, producing thousands or millions of...2867 days ago
Genome Assembly Tools and Software - PART1 !!
...s The purpose of this Python module is help scientists use opti...t length and other features of indvidual sequencing technologies. It...a reference genome. The contigs produced by Rnnotator are highly ac...nerating a much smaller set of nonredundant contigs. It contains scr...2684 days ago
Source Code and Pseudo Code !!
An algorithm is a procedure for solving a problem in terms of the actions to be executed and the order in which those actions are to be executed. An algorithm is merely the sequ...2657 days ago
Perl Special Vars Quick Reference
...ch Miscellaneous @F Autosplit (-a mode) recipient. @INC List of library paths. %INC Keys are filenames, values are paths to modules included via use, req...2642 days ago
Quick next generation sequencing (NGS) terms definition
...n-concordant read pair is considered discordant. Note that, by definition, the discordant read pairs signal potential SVs. The sequence signature produced by these type of reads is...2520 days ago
Awesome perl frameworks, libraries and software - PART 1
...l (Perl web micro-framework) duckduckgo/zeroclickinfo-goodies&nbs...pp, command line tool, Perl modules and Apache module. perl6/...runit skx/templer - A modular extensible static-site-gen...Prime-Util - Perl (XS) module implementing prime number u...2487 days ago
- It is often necessary to import sample textbook data into R before you start working on your homework. Excel File Quite frequently, the sample data is in E...
2487 days ago
Phylogenetic & Molecular Genetics Terms and Definitions
...ism, population, or species is descended by reproduction. apomorphy -- specializ...scent; any series of organisms connected by reproduction by parent of offspring....organisms; the patterns of lineage branching produced by the true evolutionary h...2460 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
...Software (C++) http://www.cs.cmu.edu/~ckingsf/software/sailfish/...ftware (C++) http://www.csbio.unc.edu/rs/ Variant calling ChimeRS...oftware (C) http://lava.csail.mit.edu/ MICADo Detection of mutati...ds) R package http://www-rcf.usc.edu/~fsun/Programs/NGS-MC/NGS-MC....2369 days ago
- ...tion for hybrid assembly - SPAdes was used to produce the B fragilis assembl...show you the options: spades.py This produces: SPAdes genome assemble...correction) --careful tries to reduce number of mismatches and sh...
2349 days ago
