Results for "Data Structure"
Top-level pages
Tools for bacterial whole genome annotation
RAST – Web tool (upload contigs), uses the subsystems in the SEED database and provides detailed...capable of processing a larger data volume. NCBI's annotati...numbers to the user's sequence data by BLAST searches, respective...achine and supported by updated databases...2344 days ago
Bioinformatics Web Application Development with Perl
Perl's second wave of adoption came from the growth of the world wide web. Dynamic w...le DBI module has been the focal point of database access since its inventio...it to provide the same interface to huge relational databases...2334 days ago
List of visualization tools for network biology
...ttp://www.arena3d.org Biana Data integration and network manag...equence, regulatory and other data http://www.biologicalnetwork...ulb.ac.be/neat/ Ondex Data integration and visualization...manually and import external data http://tinyurl.com/yEdGraph/ We...2301 days ago
List of visualization tools for genome alignments
Genome browsers are useful not only for showing final resul...g analysis protocols, testing data quality, and generating resul...e assembly and associated metadata http://www.bcgsc.ca/platform...t-generation sequencing (NGS) data and the results of analyses w...d visualization of sequencing data htt...2296 days ago
Awk for Bioinformatician and computational biologist
...h allows easy manipulation of structured data and is mostly used for patter...m the file. $ awk '{print;}' data/test.tsvcontig1 ACTGTCTGTCACT...1","$2;}END{print "-------"}' data/test.tsvHeader,Sequencecontig...TTTATATATT You can also store data in the memory with the syntax VARI...2292 days ago
Computational resources for TE discovery and TE detection
Transposable Elements (TEs) to genome structure and evolution as well as their impact on genome sequencin...an.edu.cn/ltr_finder/ LTR_STRUC http://www.genetics.uga.edu/retrolab/data/LTR_Struc.html LTR_MINER http://...2286 days ago
Webinar on RNA-Seq Data Analysis on 28 Feb 2018
Strand NGS is a biologist friendly NGS analysis tool that allows biologists to analyze their data using a very intuitive workfl...and visualization of RNA-Seq data. This webinar will give an ov...supports large scale RNA-Seq data analysis too. The tool also s...and leaves more time for end data inte...2277 days ago
Python learning resources for bioinformatics and computational biologist !
...Python is great for backend web development, data analysis, artificial intellig...ademy Python Composing Programs (3.x) Data Structures and Algorithms in Pytho...r (PDF) Problem Solving with Algorithms and Data Structures using Python - Bradley...2268 days ago
Some useful Bioinformatics links
Reference-free prediction of rearrangement breakpoint reads | Bioinform...-free SNP detection: dealing with the data deluge https://www.ncbi.nlm....sualization of Multidimensional Omics Data https://www.ncbi.nlm.nih.gov...e novo using only nanopore sequencing data | Na...2254 days ago
Installing Bio::SCF perl module
Most Perl modules are written in Perl, some use XS (they are written in .../libread.a'make[2]: Nothing to be done for 'install-data-am'.make[2]: Leaving director...trace_dump'make[2]: Nothing to be done for 'install-data-am'....2231 days ago
