TRRUST v2: an expanded reference database of human and mouse transcriptional regulatory interactions
TRRUST contains 8,444 and 6,552 TF-target regulatory relationships of 800 human TFs and 828 mouse TFs, respectively...illion pubmed articles, we used sentence-based text mining approach. TRRUST database al...2337 days ago
Japanese Multi Omics Reference Panel, jMorp
Japanese Multi Omics Reference Panel, jMorp, is a database of metabolome and proteome data in plasma obtained from volunteers in ToMMo. Metabolome data were measured by proton NMR...2335 days ago
Building Web UIs With Mojolicious Perl
Mojolicious is one of 3 leading web frameworks available i...rite. Mojolicious aims to provide a complete web development experience. It thus has no hard dependencies, comes with a built-in development and production server and man...2331 days ago
Ra assembler - a de novo DNA assembler for third generation sequencing data
Integration of the Ra assembler - a de novo DNA assembler for third generation sequen...Boskovic Institute (RBI) and Genome Institute of Singapore (GIS). Ra is in development since 2014 in the form of sev...2330 days ago
mojolicious: a next generation web framework for the Perl programming language.
Back in the early days of the web, many people learned Perl because of a wonderful Pe...Unicode support and much more for you to discover. A powerful web development toolkit, that you can use for...2315 days ago
HTTDB - Horizontally transferred transposable elements database
Transposons or Transposable elements (TEs) are "mobile genes" capable of mobilization fr...na. Based on these concerns, we developed the HTT database to keep an updated repository...y TE specialists to add new events and search the database, b...2304 days ago
ETE 3: Reconstruction, Analysis, and Visualization of Phylogenomic Data
ETE v3, featuring numerous improvements in the underlying library of methods, and providing a novel set of standalo...plications, and (iv) providing seamless integration with the NCBI taxonomy database....2277 days ago
Generate interactive codon usage plots
Generate interactive codon usage plots as used at ensembl.lepbase.org. The input file format can be generated from an Ensembl database using the export_json.pl script from the easy-import pipeline. live demo2268 days ago
UCSC SARS-CoV-2 Genome Browser
The UCSC SARS-CoV-2 Genome Browser (https://genome.ucsc.edu/covid19.html) is an adapt...all investigators to contribute to this resource to accelerate research and development activities globally....860 days ago
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