Results for "Dot Net and Sql"

Bio-Scripts

  • DotPlot with Perl GD

    ...m requirements: requires perl and perl modules # DB_File and GD.pm, available from CPAN....Create a PNG ("portable network graphics") file that displays a triangular dot plot of the input sequence a...$seqfile, $second, $outfile, $dotfile, $word, $step, $pixels, $...

    2707 days ago

  • DotPlot with Perl

    #!/usr/bin/perl use strict;use warnings; my $i;my $j;my $a; open (FH1,'

    2707 days ago

  • Compile CPP to exe

    You have to compile the code with a C++ compiler. TDM-GCC MinGW compiler which...download from this link: https://sourceforge.net/projects/tdm-gcc/ Once you download and install the compiler, you nee...containing the .cpp files using the "cd" command...

    864 days ago

  • Downloading GATK !

    ...ES/FILE gatk forwards commands to GATK and adds some sugar for submittin...that pass quality thresholds and Illumina-specific filters....AM/CRAM by read group, sample and library name SplitSamByL...e different files. NeuralNetInference...Apply 1d Convolutional Neural Net...

    2089 days ago

  • Installing pb-assembly on Linux !

    ...randrproto/1.5.0-foss-2016a HDF5/...26hfc679d8_3 bioconda networkx: 2.2-py_1...01 conda-forge sqlite: 3.25.2-h...e: 0:00:00 21.90 MB/s pbcommand-1.1. 100% |##################...

    2048 days ago

  • Installing nupack3.0.6

    #http://www.nupack.org/downloads/source ➜...../src/shared/constants -c -o ReadCommandLineNPK.o ReadCommandLineNPK.c ReadCommandLineNPK....fp); // Possibly secondary structure in dot-parens ^~~~~~~~~~~~~~...esult] fscanf(seedFile, "%u\n", &rand...

    2040 days ago

  • Setting up autoConTAMPR !

    (base) jit@jit-HP-Pro-3335-MT:~/Downloads/testDock$ docker build -t autocontampr . Sending build context to Docker daemon 9.024MB Step 1/16 : FROM ubuntu:14.04 -...

    1456 days ago

  • Install Kraken2 using conda !

    (JitMetaENV) ➜ day2 conda install -c bioconda kraken2 Collecting package metadata (current_repodata.json): done Solving environment: failed with initial frozen sol...

    1230 days ago

  • Tadpole is 250x faster than SPADes assembler !

    ...ut= mode=correct Extension and correction may be done simult...if using junk-removal flags. dot= Write a contigs con...faster and more memory-efficient. A flo...xtend sequences to be longer, and optionally...kmer-counting, and...

    990 days ago

  • Simulate the reads !

    # make reference for randomreads.sh # randomreads.sh part of BBTools/BBMap https://sourceforge.net/projects/bbmap/ /genetics/elbers/bbmap-38.86/randomreads.sh build=1 \...verage for Illumina reads /genetics/elbers/bbmap-38.86/randomreads.sh build=1 \ ref=GCA_...

    942 days ago