3381 days ago
2935 days ago
2684 days ago
DeCoSTAR - Detection of Co-evolution
...n pairs of ancestral genes or gene domains.Ancestral genes or domains are deduced from reconciled gene trees in a context of birth, speciation, duplication, loss, transfer, which are ei...2571 days ago
2357 days ago
phyloXML: XML for evolutionary biology and comparative genomics
...ovides elements for commonly used features, such as taxonomic information, gene names and identifiers, branch lengths, support values, and gene duplication and speciation events. Using...2342 days ago
2275 days ago
SDA: Long-read sequence and assembly of segmental duplications
Segmental Duplication Assembler (SDA; https://github.com/mvollger/SDA) constructs graphs in which paralogous sequence variants define the nodes and long-read sequences provide...1881 days ago
phyloXML: XML for evolutionary biology and comparative genomics
...ovides elements for commonly used features, such as taxonomic information, gene names and identifiers, branch lengths, support values, and gene duplication and speciation events. Using...1603 days ago
1375 days ago