3394 days ago
2948 days ago
2697 days ago
DeCoSTAR - Detection of Co-evolution
...n pairs of ancestral genes or gene domains.Ancestral genes or domains are deduced from reconciled gene trees in a context of birth, speciation, duplication, loss, transfer, which are ei...2584 days ago
2370 days ago
phyloXML: XML for evolutionary biology and comparative genomics
...ovides elements for commonly used features, such as taxonomic information, gene names and identifiers, branch lengths, support values, and gene duplication and speciation events. Using...2355 days ago
2288 days ago
SDA: Long-read sequence and assembly of segmental duplications
Segmental Duplication Assembler (SDA; https://github.com/mvollger/SDA) constructs graphs in which paralogous sequence variants define the nodes and long-read sequences provide...1894 days ago
phyloXML: XML for evolutionary biology and comparative genomics
...ovides elements for commonly used features, such as taxonomic information, gene names and identifiers, branch lengths, support values, and gene duplication and speciation events. Using...1616 days ago
1388 days ago