Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm)
Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm) is a microbial (bacterial and archaeal) gene finding program developed at Oak Ridge National Laboratory and...2682 days ago
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Enrichr: a comprehensive gene set enrichment analysis
Enrichment analysis is a popular method for analyzing gene sets generated by genome-w...ding the ability to submit fuzzy sets, upload BED files, improved application programming interface and visualization o...2563 days ago
GRASS: a generic algorithm for scaffolding next-generation sequencing assemblies.
GRASS (GeneRic ASsembly Scaffolder)-a novel algorithm for...information sources. GRASS offers a mixed-integer programming formulation of the contig sca...n procedure and an unconstrained binary quadratic programming approximation of the original...2537 days ago
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MOSS: A System for Detecting Software Similarity
Moss (for a Measure Of Software Similarity) is an automatic system for determining th...ms. To date, the main application of Moss has been in detecting plagiarism in programming classes. Since its developmen...2337 days ago
Mulan: MUltiple sequence Local AligNment and conservation visualization tool
Mulan performs multiple (2 or more) sequence alignments with an efficient and rapid "full local" alignment strategy...ols to align either "draft" or "finished" quality sequences. Mulan provides a dynamic gra...2479 days ago
Computational Genomics: Applied Comparative Genomics
The primary goal of the course is for students to be grounded in theory and leave the...ites, although the course will require familiarity with UNIX scripting and/or programming to complete the assignments a...2347 days ago