3962 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
...llow one to investigate the statistical properties of such samples, to evaluate estimators or statistical tes...llow one to investigate the statistical properties of such samples, to evaluate estimators or statistical tes...3752 days ago
List of In-silico Binding Site Prediction Tools
...and split-pocket fragments is superimposed to evaluate the local structural similari...rediction success rate. All these methods are evaluated on two datasets of 48 unboun...their corresponding apo-protein structures to evaluate the quality of binding-site p...3759 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...ption: Combines patient's’ disease symptoms with sequencing data; Standalone or Web app version; Only excepts 1 family per run, in order to evaluate unrelated individuals, each s...2924 days ago
Genome Assembly Tools and Software - PART1 !!
...essment Tool for Genome Assemblies QUAST evaluates genome assemblies.QUAST work...th packages are mainly intended to be used to evaluate de novo transcriptome assembl...including the A5 pipeline, A5-miseq, tools to evaluate assembly quality, and scripts...2701 days ago
Ancestral sequence reconstruction steps !
...saturation index, I perform with "http://dambe.bio.uottawa.ca/dambe.asp"; 4- Has evidence of possible recombination in your dataset, the evaluate if this presence or absence,...2194 days ago
My commonly used commands in Bioinformatics
FYI, I've found it useful to use MUMmer to extract the specific changes that Racon makes, so I can evaluate them individually: minimap -t 24 assembly.fasta long_reads.fastq.gz | racon...2125 days ago
2095 days ago