Results for "Exploring Gene Networks"
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Horizontal gene transfer (HGT), the transfer of genetic material between organisms, is crucial for genetic innovation and the evoluti...s is challenging, as the phylogenetic signal is usually weak and...o measure the divergence of a gene from its native genomic envir...detecting all newly acquired genes in...2887 days ago
- ...chromatin folding and affect gene expression levels. Genomic te..., e.g., ChIA-PET and HiC, can generate genome-wide maps of inter...alizing chromatin interaction networks, 2) annotating networks with user-provided private an...g network components based on gene name or chromosome location, and...
2882 days ago
- CSBB is a command line based bioinformatics suite to analyze biological data acquired through varied avenues of b...forming upper-quantile normalization on expression data or convert genome wide gene exp...
2880 days ago
- The greengenes web application provides access to the 2011 version of the greengenes 16S rRNA gene sequence alignment for brows...ading. The data and tools presented by greengenes can assist the researcher in...s. If you are an ARB user, you can use greengenes to...
2880 days ago
- Records in 4DGenome are compiled through comprehensive literature curation of experimentally-derived and computat...able in a standardized file format. Records can be queried by genomic regions, gene nam...
2876 days ago
- Microbiome analysis using a single application MEGAN6 is a comprehensive toolbox f...ts, word clouds, Voronoi tree maps and many other charts PCoA, clustering and networks Supports metadata MEGAN par...
2854 days ago
- Bambus 2.0, the second generation Bambus scaffolder available as an open source package. While most other s...irectly use the output of MUMmer), physical mapping data, or information about gene syn...
2832 days ago
GeneValidator - Identify problems with predicted genes
GeneValidator helps in identifing problems with gene predictions and provide useful information extra...by biocurators and researchers who need accurate gene predictions. If you would li...alidator on a few sequences, see our online GeneVali...2822 days ago
- In this exercise, a previously annotated gene will be used to measure the accuracy of different gene finding approaches. GRAIL, GENSCAN, geneid, FGENESH, GenomeScan, GrailEXP and GENEWISE will be use...http://genome.crg.es/courses/Bioinformatics2003_genefind...
2822 days ago
Method in Comparative genomics !!
We present methods for the automatic determination of genome cor...rthologs for more than 90% of genes and intergenic regions acros...he large number of duplicated genes in the yeast genome. The rem...ntification of protein-coding genes based on their patterns of n...rely on previous knowledge of gene fun...2747 days ago
