Results for "Exploring Gene Networks"
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Modular, efficient and constant-memory single-cell RNA-seq preprocessing
With kallisto | bustools you can Generate a cell x gene or cell x transcript equivalence class count matrix Perform RNA velocity and single-nuclei RNA-seq...1139 days ago
- PANDASEQ assembles paired-end Illumina reads into sequences, trying to correct for errors and uncalled bases. The...amplification primers were used (e.g., to isolate a variable region of the 16S gene, or...
2672 days ago
- Our basic strategy in building homology maps is to use exons that are orthologous in multiple genomes as map "anc...ncorrect annotations are not likely not have significant alignments with other gene ann...
2658 days ago
fineSTRUCTURE v2 & GLOBETROTTER
Software available at this site FineSTRUCTURE version 2, a pipeline for running Chromo...rpretation. Download from the Downloads page. FineSTRUCTURE R scripts, a facility for explorin...2651 days ago
- ...a rational visualization method for drawing networks. Nodes are mapped to and posit...sh a new baseline for visualization of large networks — a method that is both general and tunable and useful as a starting point in visually exploring network structure. More at&...
2648 days ago
- BRIG is a free cross-platform (Windows/Mac/Unix) application that can display circular comparisons betwee...graphs and annotations can be displayed. Using a user-defined set of genes as input, BRIG can display gene pre...
2648 days ago
DAGchainer: Computing Chains of Syntenic Genes in Complete Genomes
The DAGchainer software computes chains of syntenic genes found within complete genome seque...input, DAGchainer accepts a list of gene pairs with sequence homology...or the distance between neighboring genes on each DNA molecule and the...amining colinear sets of homologous genes fo...2647 days ago
Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG 2017
Strand Life Sciences announces the release of Strand NGS v3.1 at ASHG 20...ting of the American Society of Human Genetics today. Two major themes i...3.1 address recent challenges in next generation sequencing (NGS). The...E plot; profile and heat-map plots of gene-bod...2400 days ago
- This project contains scripts and tutorials on how to assemble individual microbial genomes from metagenomes, as...ng of multiple metagenomesMads Albertsen, Philip Hugenholtz, Adam Skarshewski, Gene W....
2633 days ago
- With PhenoGram researchers can create chomosomal ideograms annotated with lines in color at specific base-pair lo...ation of chromosomal locations and/or regions with shapes in different colors, gene ide...
2629 days ago
