2076 days ago
Run Pango on your multifasta file !
...3:10:08 /home/jnarayan/anaconda3/envs/pangolin/lib/python3.8/site-packages/sklearn/base.py:438: UserWarning: X has feature names, but DecisionTreeClassifier was fitted without feature names warnings.warn( comp...888 days ago
Install Install Gffcompare on Ubuntu / Linux
#Gffcompare is a program that is used to perform operations on general feature format (GFF) and general transfer format (GTF) files. It has a binary distribution compatible with the l...824 days ago
824 days ago
95 days ago
Python script to parse GFF file
def parse_gff(gff_file): features = [] with open(gff_file, 'r') as f:...s = line.strip().split('\t') feature = { 'seq...lit(';')) } features.append(feature) return...39 days ago