Apps for Busy Bioinformatics Researchers !!!
...mber variations (CNVs), and loss of heterozygosity (LOH) events Quickly find variants of interest by filte...r/id637353801?mt=8 YeastGenome: iPhone/iPad Use YeastGenome to quickly find fundamental information about...3536 days ago
A guide for complete R beginners !
...al data set from http://bioinformatics.knowledgeblog.org/wp-content/uploads/bioinf/kerr/data.tsv Start R (type R on a Linux or Mac terminal, or find the starting link from PC)...3356 days ago
Rosalind Problem Solution with Perl
...learning bioinformatics and programming through problem solving. Take a tour to get the hang of how Rosalind works. Bioinformatics Textbook Track Find more about Rosalind puzzle at...3247 days ago
Software packages for next gen sequence analysis
...as the human reference genome. By default, BWA finds an alignment within edit dis...ent by Hashing Algorithm) is a tool for rapidly finding near exact matches in DNA...the National University of Singapore. Perl/R. * FindPeaks - perform analysis of Ch...3237 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...wnloads Output: FreeBayes Description: finds SNPs, Indels, MNPs; reports...VCF using bcftools Snippy Description: finds indels between haploid refer...otated, this can be used to filter your data to find relevant variants Input: Ou...2903 days ago
Worldwide funding agencies to fund your bioinformatics research !!
...e directly concerned with tinnitus and contribute to ATA’s goal of finding a cure. American Brain Tu...Fund seeks to foster an environment of creativity and discovery aimed at finding solutions to children&rsqu...2932 days ago
2868 days ago
Genome Assembly Tools and Software - PART1 !!
...n functionalities.1.Assembly. This step performs k-mer counting. Then we find frequent k-mers whose frequen...marks are described in the Genome Biology manuscript. misFinder v0.4.05.05 – Identify...2680 days ago
Run miniasm assembler on nanopore reads !
...tenates pieces of read sequences to generate the final unitig sequences. Thus the per-base error rate is similar to the raw input reads. Find the detail of the reads repea...2324 days ago
PerlOneLiner for Bioinformatician
...ne 'print join " ", shuffle @F' # Find the minimum element on a line...::Util=min -alne 'print min @F' # Find the minimum element over all...(rand($max-$min))+$min } 1..$n' # Find and print all permutations of...numberperl -ne 'print if /\d/' # Find all lines that contain only a...2296 days ago