Results for "Fragment"
Top-level pages
Useful Publications and Websites for Deep Sequencing Data Analysis
...cript expression profiling. Łabaj et al, Bioinformatics 27:i383 - i391, 2011 Full Text Improving RNA-Seq expression estimates by correcting for fragment bias. Roberts et al, Genome B...3792 days ago
List of In-silico Binding Site Prediction Tools
...we utilize the Smith-Waterman algorithm to footprint an unbound pocket fragment with those selected from the...uchicago.edu/). The pairwise alignment of the unbound and split-pocket fragments is superimposed to evaluate...3757 days ago
Next generation sequencing in R or bioconductor environment
...tify regions bound by transcription factors. PICS identifies enriched regions by modeling local concentrations of directional reads, and uses DNA fragment length prior information to d...3638 days ago
- ...sequencing, both ends of a single DNA or RNA fragment are sequenced, but the interm...rocess where both ends of a single DNA or RNA fragment are sequenced, but the interm...ng process where only one end of a DNA or RNA fragment is sequenced. Contrast with p...
2882 days ago
Quick next generation sequencing (NGS) terms definition
fragment size: the Illumina WGS prot...d reads from both ends of longer fragments. The lengths of these fragments are assumed to be sampled fr...rom no-SV regions, therefore the fragment size distribution can be lear...the minimum and maximum expected fragment size.discordant reads: b...2535 days ago
