Results for "Functional Analysis"

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  • Understanding PacBio

    This tutorial includes resources for learning more about PacBio data and bioinformatics analysis, and includes content suitabl...Applications: De Novo Assembly Transcriptome analysis Base Modification Analysis...

    2628 days ago

  • KisSplice

    KisSplice is a software that enables to analyse RNA-seq data...possible post-treatments meant to facilitate the analysis of the results. The choice of...riptome and on the need to perform a differential analysis, as summarised in the followi...

    2820 days ago

  • EUKulele: Taxonomic annotation of the unsung eukaryotic microbes

     EUKulele, an open-source software tool designed to assign taxonomy to microeukaryotes detected in meta-omic samples, and complement analysis approaches in other domains by accommodating assembly output and providing concrete metrics reporting the taxonomic completeness of each sample.

    1227 days ago

  • TGNet

    Recent technological progress has greatly facilitated de novo genome sequencin...rming and improving the quality of such assemblies is critical for subsequent analysis.  Visualization and qua...

    2812 days ago

  • Method in Comparative genomics !!

    We present methods for the automatic determination of genome correspondence. The algorithm...ved the pressure to conserve the reading frame of functional proteins and developed a test...The majority of discovered motifs are enriched in function...

    2735 days ago

  • Sybil

    The Sybil software package provides a primarily web-based front-end to comparative genom...Park to support a number of research projects that involve comparative genome analysis. The following sections provi...

    2798 days ago

  • MIRO : miRNA omics

    The MIRO (the miRNA omics) pipeline is a flexible and powerful tool for the analysis of miRNA (or more generall sh...implementation MIRO is especially adapted for the analysis of reads generated with the I...

    2771 days ago

  • PHYMMBL

    Metagenomics sequencing projects collect samples of DNA from...a useful prerequisite for genome assembly and for analysis of the biological diversity p...fier included in this distribution which combines analysis from both Phymm and BLAS...

    2765 days ago

  • GenomeScope: open-source web tool to rapidly estimate the overall characteristics of a genome, including genome size, heterozygosity rate, and repeat content from unprocessed short reads

    Summary: GenomeScope is an open-source web tool to rapidly estimate the over...l for studying genome evolution, and help to choose parameters for downstream analysis. We demonstrate its accuracy...

    2346 days ago

  • Beagle

    Beagle is a software package that performs genotype calling, genotype phasing, imputatio...genotypes, please use version 4.0. If you use Beagle 4.1 in a published analysis, please report the program ve...

    2748 days ago