Computational Genomics: Applied Comparative Genomics
The primary goal of the course is for students to be grounded in theory and leave the course empowered to conduct independent genomic analyses. We will study the leadi...2364 days ago
2364 days ago
PLAST: A fast, accurate and NGS scalable bank-to-bank sequence similarity search tool
...o-bank sequence similarity search tool providing significant accelerations of seeds-based heuristic comparison methods, such as the Blast suite of algorithms. Relying on unique sof...2362 days ago
dnaPipeTE: de-novo assembly & annotation Pipeline for Transposable Elements
...ly sequenced genomes since it does not require genome assembly and works on small datasets (< 1X). dnaPipeTE is developped by Clément Goubert, Laurent Modolo and the...2361 days ago
Musket: a multistage k-mer spectrum based corrector
Musket is a well-established leading next-generation sequencing read error correction algorithm targetting Illumina sequencing. This corrector employs the k-mer spectrum a...2357 days ago
ACANA: An accurate and consistent alignment tool for DNA sequences
...ely conserved regions and/or have a high frequency of long insertions or deletions. It attempts to combine the best of local and global alignments algorithms in searching for evolut...2357 days ago
FOGSAA: Fast Optimal Global Sequence Alignment Algorithm
Sequence alignment algorithms are widely used to infer similarirty and the point of differences between pair of sequences. FOGSAA is a fast Global alignment algorithm. It is basically a branc...2355 days ago
MOSS: A System for Detecting Software Similarity
...its development in 1994, Moss has been very effective in this role. The algorithm behind moss is a significant improvement over other cheating detection algorithms (at least, over those k...2354 days ago
2353 days ago
2352 days ago