GRIDSS: the Genomic Rearrangement IDentification Software Suite
GRIDSS is a module software suite containing tools useful for the detection of genomic rearrangements. GRIDSS includes a genome-wide break-...ural variation caller for Illumina sequencing data. GRIDSS calls variants based on align...1461 days ago
Installing Covid19 Environment !
...UpdateTaxonomy.sh \ The default QUAST package does not include: * GRIDSS (needed for structural varian...Linux only! To be able to use those, please run quast-download-gridss quast-download-silva...935 days ago
GRIDSS: the Genomic Rearrangement IDentification Software Suite
GRIDSS is a module software suite containing tools useful for the detection of genomic rearrangements. GRIDSS includes a genome-wide break-end assembler, as well as a structural variation caller for Illumina sequencing data. GRIDSS calls variants based on alignment-guided positional de Bruijn gra...Tags: GRIDSS, Genomic, Rearrangement, IDentification, Software, Suite
1461 days ago
Comment on "List of non-commercial NGS genotype-calling software"
...ry. [ paper-2014 ] manta – Structural variant and indel caller for mapped sequencing data. [ paper-2015 ]gridss – GRIDSS: the Genomic Rearrangement ID...1154 days ago
Comment on "Structural variation: the hidden genomic treasure"
I like this tool GRIDSS: the genomic rearrangement identification softw...ext-gen sequencing structural variation caller. GRIDSS calls variants based on align...pair evidence. https://github.com/PapenfussLab/gridss2715 days ago