Results for "Gene Expression."
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MetaPred2CS Web server is a meta-predictor based on Support Vector Machine (SVM) that comb...tree (MT) methods and 4 genomics context based methods: phylogenetic profiling (PP), gene fusion...2635 days ago
- MAKER is a portable and easily configurable genome annotation pipeline.Its purpose is to allow sm...eats, aligns ESTs and proteins to a genome, produces ab-initio gene predictions and automatically synthesizes these data into gene annota...
3024 days ago
- This is a collection of libraries and high-quality end-user scripts for bioinformatic analysis, including working with gene annotation, collecting data s...a unified, abstracted interface to multiple common gene annota...
3012 days ago
Ensembl comparative genomics resources
The Ensembl comparative genomics resources are one such reference set tha...s and constrained elements are obtained. Gene alignments are used to define Ensembl Protein Families, GeneTrees and homologies for both...displays, collapsible gene tree plots, a gene family...3003 days ago
RNA-Seq De novo Assembly Using Trinity
Trinity, developed at the Broad Institute and the Hebrew University of J...nscriptional complexity at at a given gene or locus, and then processes...t transcripts derived from paralogous genes. Briefly, the process works...cripts that corresponds to paralogous genes....2980 days ago
HOMER: Software for motif discovery and next-gen sequencing analysis
This tutorial covers topics independently of HOMER, and represents knowledge which is...lic sources) Checking sequence quality, trimming, general sequence manipulation Map...Seq) Microarray Basic analysis of Affymetrix Gene Expres...2946 days ago
- AccNET is a Perl application that presents a new way to study the accessory genome of...n network analysis platforms. AccNET collects phylogenetic and functional information...ganization through elements acquired by horizontal gene transf...
2782 days ago
- High-throughput genomics has revolutionized biological research, howev...tative assessment of genome assembly, gene set, and transcriptome comple...olutionarily informed expectations of gene content from near-universal s...mics studies, and the annotated BUSCO gene models...
2932 days ago
- A free extensible and customizable gene annotation portal, a complete resource for learning about gene and protein function. http://biogps.org/#goto=welcome
2919 days ago
- statistical analysis and visulization of functional profiles for genes and gene clustersBioconductor version: Release (3.3)...ualize functional profiles (GO and KEGG) of gene and gene clusters.Author: Gua...ckage for comparing biological themes among gene cluste...
2894 days ago
