Results for "Gene expression"
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Horizontal gene transfer (HGT), the transfer of genetic material between organisms, is crucial for genetic innovation and the evoluti...s is challenging, as the phylogenetic signal is usually weak and...o measure the divergence of a gene from its native genomic envir...2871 days ago
- ...h each other via chromatin folding and affect gene expression levels. Genomic technol...ween DNA regions, e.g., ChIA-PET and HiC, can generate genome-wide maps of inter...sets, 3) querying network components based on gene name or chromosome location, and 4)...
2866 days ago
- ...platforms. Currently CSBB provides 13 modules focused on analytical tasks like performing upper-quantile normalization on expression data or convert genome wide gene expression to z-scores when comparing ex...
2864 days ago
- The greengenes web application provides access to the 2011 version of the greengenes 16S rRNA gene sequence alignment for brow...ding. The data and tools presented by greengenes can assist the researcher in.... If you are an ARB user, you can use greengenes to k...
2864 days ago
- Records in 4DGenome are compiled through comprehensive literature curation of experimentally-derived and computat...able in a standardized file format. Records can be queried by genomic regions, gene names...
2859 days ago
- Bambus 2.0, the second generation Bambus scaffolder available as an open source package. While most other s...irectly use the output of MUMmer), physical mapping data, or information about gene synte...
2816 days ago
GeneValidator - Identify problems with predicted genes
GeneValidator helps in identifing problems with gene predictions and provide useful information extra...by biocurators and researchers who need accurate gene predictions. If you would li...alidator on a few sequences, see our online GeneValida...2806 days ago
- In this exercise, a previously annotated gene will be used to measure the accuracy of different gene finding approaches. GRAIL, GENSCAN, geneid, FGENESH, GenomeScan, GrailEXP and GENEWISE will be us...http://genome.crg.es/courses/Bioinformatics2003_genefindin...
2806 days ago
Method in Comparative genomics !!
We present methods for the automatic determination of genome cor...rthologs for more than 90% of genes and intergenic regions acros...he large number of duplicated genes in the yeast genome. The rem...ntification of protein-coding genes based on their patterns of n...rely on previous knowledge of gene funct...2730 days ago
- Gene finding in eukaryotic genomes is notoriously difficult to automate. The task i...-art performance across a wide range of species. GeneMark-ET is a gene prediction tool that incorpor...the prediction step. Complementary strengths of GeneMark-E...
1947 days ago
