Results for "Generation"
Top-level pages
...ther invention, improved development toward new advanced strategies of high-throughput DNA sequencing, so called the “high-throughput next generation sequencing” (HT-NGS). T...3959 days ago
- ...ds Res. 28:235–42Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ (1997) Gapped BLAST and PSI–BLAST: a new generation of protein database search pr...
3958 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...assessment of Illumina second-generation sequencing data. Cox et al, B...of large genomes using second-generation sequencing. Schatz et al, Gen...nscriptome assembly from next-generation sequencing data. Surget-Groba...framework for analyzing next-generation DNA sequencing data. McKenna...3791 days ago
List of bioinformatics open source projects/software.
...romoter analysis by Kappa) software program used for promoter pattern generation and promoter analysis. MeV:...e Analysis Toolkit 1.0 (GATK 1.0) a software package to analyse next-generation resequencing data3768 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
...hods in statistical genetics by generating samples of family data based on user specified models. http://research.nhgri.nih.gov/gasp/GemSIM Next generation sequencing read simulator htt...3748 days ago
Next generation sequencing in R or bioconductor environment
There are many R software and bioconductor packages for NGS data analysis, some of them are as follows Biostrings The Biostrings package from Bioconductor provides an a...3636 days ago
Commercial and public next-gen-seq (NGS) software
...Analyser - Software for Next Generation sequence assembly of Illumina...ix. gnumap - The Genomic Next-generation Universal MAPper (gnumap) is...short reads, emerged by next-generation sequencing technology, back t...ornia, BerkeleyNGS-Trex: Next Generation Sequencing Transcriptome prof...3530 days ago
Software packages for next gen sequence analysis
...- Integrated Solutions for Next Generation Sequencing data analysis. * J...me Analyser - Software for Next Generation sequence assembly of Illumina...ix. * gnumap - The Genomic Next-generation Universal MAPper (gnumap) is...of short reads, emerged by next-generation sequencing technology, back t...3254 days ago
- ...tions. None of these will break pairing, if the input is paired. Quality trimming (either or both ends) Quality filtering Fixed-length trimming Generation of histograms (base compositi...
2725 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...and ChIP, and methylation. Next Generation Sequencing (NGS) workflows in...s Supports all commercial next generation sequencing and microarray fil...ference allele loci from second generation sequencing data”; Bayes...s, especially for automated set-generation and enrichment of likely func...2920 days ago
