Results for "Genetic Code"
Bookmarks
fqtools is a software suite for fast processing of FASTQ files. Various file manipulations are supported. See below for a full list of the subcommands a...2706 days ago
Standardized velvet assembly report
Requirements: velvet (velveth velvetg should be in your PATH) R (with Sweave) pdflatex (usually part of TeTeX) ggplot2 (from R prompt type install.packages("ggpl...2705 days ago
CISA: Contig Integrator for Sequence Assembly
A plethora of algorithmic assemblers have been proposed for the de novo assembly of ge...nd requires MUMmer and BLAST+ to be installed on the local machine. The source code of CISA and examples of its u...2699 days ago
E-MEM: Efficient computation of Maximal Exact Matches
E-MEM is a C++/OpenMP program designed to efficiently compute MEMs between large g...ee the README file for instructions on how to use E-MEM. E-MEM source code The source code can be downloaded here.&...2699 days ago
- pyScaf orders contigs from genome assemblies utilising several types of information: paired-end (PE) and/or mate-pair libraries (NGS-based mode) long reads (NGS-ba...
2694 days ago
Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm)
Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm) is a m...earns all the properties it needs to on its own. Open Source: Prodigal source code is freely available under the...2685 days ago
- v0.0 by Glenn Hickey (hickey@soe.ucsc.edu) Progressive Cactus is a whole-genome alignment package. Requirements git gcc 4.2 or newer python 2.7 wget 64bit pro...
2666 days ago
Many-Core Engine (MCE) for Perl example
MCE spawns a pool of workers and therefore does not fork a...ow is similar to MCE::Loop, but allows for multiple code blocks to run in parallel wit.... Like with MCE::Flow, MCE::Stream can run multiple code blocks in parallel with a sli...2652 days ago
TMAP - torrent mapping alignment program General Notes
TMAP - torrent mapping alignment program General Notes TMAP is a fast and accurate al...sion associated with a Torrent Suite release below. Get the latest source code: git clone git://github.co...2590 days ago
- The official documentation of the Perl 6 programming language is now published! Beside...ther utilities, how to debug Perl 6 programs, and how to hack on Perl 6 source code. The Perl 6 homepage o...
2649 days ago
