Results for "Genetic Engineering"

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  • Stacks

    Stacks is a software pipeline for building loci from short-read sequences, such as those generated on the Illumina...h restriction enzyme-based data, such as RAD-seq, for the purpose of building genetic map...

    2999 days ago

  • NearHGT

    Horizontal gene transfer (HGT), the transfer of genetic material between organisms, is crucial for genetic innovation and the evolution of genome...ction algorithms rely on a strong phylogenetic signal distinguishing the tra...or strains is challenging, as the phylogenetic sig...

    2881 days ago

  • OrganellarGenomeDRAW

    OrganellarGenomeDRAW is dedicated to convert genetic information stored in GenBank entries to graphical maps. The input text file has to be in GenBank flat file format, wherea...

    2826 days ago

  • Strudel

    Strudel is our graphical tool for visualizing genetic and physical maps of genomes for comparative purposes. The application aims to let the user examine their data at a variety...

    2781 days ago

  • MafTools

    maftools - An R package to summarize, analyze and visualize MAF files. Introduction. With advances in Cancer Genom...ple size of each cancer type being over 200. The resulting data consisting of genetic var...

    2642 days ago

  • DIAL

    A computational pipeline for identifying single-base substitutions between two closely related genomes without the...l insertions/deletions. Our main motivation is to use this tool to survey the genetic div...

    2629 days ago

  • Synteny Portal: a web-based application portal for synteny block analysis

    Synteny Portal, a versatile web-based application portal for constructing, visualizing and browsing synteny blocks....ntenic relationships as high-quality images, (iii) browse synteny blocks with genetic inf...

    2545 days ago

  • Genetic-mapper: SVG Genetic Map Drawer

    Genetic-mapper is a perl script able to draw publication-ready vectorial genetic maps. Perl script for creating a publication-ready vectorial genetic/linkage map in Scalable Vecto...843341 ... https://github.com/pseudogene/genetic-map...

    2520 days ago

  • PATRISTIC: a program for calculating patristic distances and graphically comparing the components of genetic change

    PATRISTICv1.0 is a java program that calculates patristic distances from large trees in a range of file formats and allows graphical and statistical interpretation of distance matrices calculated by other programs.

    2469 days ago

  • Ra assembler - a de novo DNA assembler for third generation sequencing data

    Integration of the Ra assembler - a de novo DNA assembler for third generation sequencing data developed on Faculty of Electrical Engineering and Computing (FER), Ruder Bo...

    2327 days ago