Results for "Genome"
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Harvest is a suite of core-genome alignment and visualization tools...usands of intraspecific microbial genomes, including variant calls, re...s. Tools Parsnp - Core-genome alignment and analysis Gingr...The Harvest suite for rapid core-genome alignment and visualization o...2663 days ago
- ...e exons that are orthologous in multiple genomes as map "anchors." Given K genomes, the steps in the map constr...are all exons against all exons in other genomes and record significant align...se that have exons in all or most of the genomes), join neighboring (adjacent...
2657 days ago
DnaSP v5: a software for comprehensive analysis of DNA polymorphism data
...(ii) haplotype phasing; (iii) analyses on insertion/deletion polymorphism data; (iv) visualizing sliding window results integrated with available genome annotations in the UCSC brows...2657 days ago
fineSTRUCTURE v2 & GLOBETROTTER
...What this page is This page provides information about and downloads for methodology for Chromosome Painting. It is not a facility to analyse your genome. Sorry if you were misled by...2650 days ago
- ...tion. With advances in Cancer Genomics, Mutation Annotation Format (MAF) is being widley accepted and used to store variants detected. The Cancer Genome Atlas Project has seqenced ov...
2647 days ago
- ...hat can display circular comparisons between a large number of genomes, with a focus on handling genome assembly data. The applicatio...Contig boundaries and read coverage can be displayed for draft genomes; customized graphs and annot...
2647 days ago
- GenomeComp is a tool for summarizing, parsing and visualizing the genome wide sequence comparison resu...angements, insertions or deletions of genome segments between species or s...sequences, especially closely related genomes such as inter-species or int...
2646 days ago
DAGchainer: Computing Chains of Syntenic Genes in Complete Genomes
...chains of syntenic genes found within complete genome sequences. As input, DAGchain...pairs with sequence homology along with their genome coordinates. Using a scoring...o mine large evolutionary conserved regions of genomes between two organisms. Alter...2645 days ago
- ...ilities are a swiss-army knife of tools for a wide-range of genomics analysis tasks. The most widely-used tools enable genome arithmetic: that is, set theory on the genome. For example, bedtools&n...
2639 days ago
ConPADE: Genome Assembly Ploidy Estimation from Next-Generation Sequencing Data
...ig/scaffold based on its allele proportions. In the process, they report findings regarding errors in sequencing. The method can be used for whole genome shotgun (WGS) sequencing data...2639 days ago
