Results for "Genome Size"
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Recent technological progress has greatly facilitated de novo genome sequencing. However, de novo assem...ualization and quality assessment of de novo genome assemblies Citation This so...ualization and quality assessment of de novo geno...2831 days ago
- A probabilistic framework for structural variant discovery. Ryan M Layer, Colby Chiang, Aaron R Quinlan, and Ira M...all. 2014. "LUMPY: a Probabilistic Framework for Structural Variant Discovery." Geno...
2830 days ago
- In this exercise, a previously annotated gene will be used to measure the accuracy of di...g approaches. GRAIL, GENSCAN, geneid, FGENESH, GenomeScan, GrailEXP and GENEWISE wi...prediction of initial exons in most cases. http://geno...
2829 days ago
- gKaKs is a codon-based genome-level Ka/Ks computation pipeline developed and based on pr...n rates (Ka, Ks and Ka/Ks) between a well-annotated genome and a non-annotated genome or...ataset. It is especially useful for newly sequenced geno...
2825 days ago
Comparative genomics educational material and papers bookmarks
Alignment of the porcine genome against seven other mammalian genomes (Supplementary Information) identified homologous synteny blocks (HSBs...EBRs (shared by pigs and cattle) were detected using the pig and human geno...2753 days ago
Method in Comparative genomics !!
We present methods for the automatic determination of genome correspondence. The algorithms ena...r of duplicated genes in the yeast genome. The remaining ambiguities in.... We used this test to revisit the genome of S. cerevisiae, reducing th...onal motif discovery. Based on the geno...2753 days ago
- ...ns scaffolded homozygous genome assembly, that should be ...nted and with total size smaller than the input con...the gaps resulting from genome assembly or scaffolding ...he laptop for small-to-medium size genomes flexible toward many...
2823 days ago
- Before uploading a data file, check the samples gallery to make sure that yo...dash; if exceeded, rows and columns are limited to 75. If you are using order, size and color rows/columns in com...
2822 days ago
OPERA : Optimal Paired-End Read Assembler
OPERA (Optimal Paired-End Read Assembler) is a sequence assembly program (...iate contigs/scaffolds assembled in a genome assembly project, in a proces...t are important for scaffolding large genomes (multi-library support, bett...s and algorithms is available at Geno...2815 days ago
- Fermi is a de novo assembler with a particular focus on assembling Illumina short sequence reads from a mammal-sized genome. In addition to the role of a typical assembler, fe...
2815 days ago
