1987 days ago
splitbam: splits a BAM by chromosomes
splitbam splits a BAM by chromosomes. Using the reference sequence dictionary (*.dict), it also creates some...| --index create index. -t | --tmp (dir) tmp file directory -G (file) chrom-group fi...2639 days ago
CABOG: Celera Assembler with Best Overlap Graph
CABOG (Celera Assembler with Best Overlap Graph) is scientific software for DNA research. CABOG has been a critical co...2563 days ago
Genetic-mapper: SVG Genetic Map Drawer
Genetic-mapper is a perl script able to draw publication-ready vectorial genetic maps. Perl script for creating a...The input file must be a text file with at least the marker name (ID), linkage group (L...2529 days ago
GeneProf: analysis of high-throughput sequencing experiment
GeneProf is a web-based, graphical software suite that a...ative Medicine / Institute for Stem Cell Research, University of Edinburgh...and has benefited from funding by the Medical Research Council and the EU...2511 days ago
LIBSVM -- A Library for Support Vector Machines
LIBSVM is an integrated software for support vector classification, (C-SVC,&nbs...n using second order information for training SVM. Journal of Machine Learning Research 6, 1889-1918, 2005. You can a...2484 days ago
RITA: Rapid identification of high-confidence taxonomic assignments for metagenomic data
RITA is a standalone software package and Web server for taxonomic assignment of met...Rapid identification of taxonomic assignments. Accepted to Nucleic Acids Research April 4, 2012. If you h...2367 days ago
Foldit: Solve Puzzles for Science
Foldit is an online puzzle video game about protein folding. It is part of an experimental research project developed by the Univ...2342 days ago
2326 days ago
An Introduction to Applied Bioinformatics
IAB is primarily being developed by Greg Caporaso(GitHub/Twitter: @gregcap...on the courses I teach on my teaching website and information on my research and lab on my lab websit...2272 days ago