Results for "INDEL"
Top-level pages
List of generic simulation software/tools/resource with brief description and homepage !!!
...er general isolation by distance models. http://raphael.leblois.free.fr/indel-Seq-Gen A biological sequence...uences and protein superfamilies http://bioinfolab.unl.edu/~cstrope/isg/Indelible A powerful and flexible s...3731 days ago
Commercial and public next-gen-seq (NGS) software
...s, clean and filter contigs, look for snps and indels., filter snps, do statistics...a fast and memory-efficient manner. Robust to INDELs and MrsFAST has a bisulphite...signed for fast mapping of Illumina reads SNP/Indel Discovery ssahaSNP - ssahaSNP...3513 days ago
Software packages for next gen sequence analysis
...a fast and memory-efficient manner. Robust to INDELs and MrsFAST has a bisulphite...eqMap - Supports up to 5 or more bp mismatches/INDELs. Highly tunable. Written by...ean Bioinformatics Institute (EMBL-EBI). SNP/Indel Discovery * ssahaSNP - ssahaS...3236 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...ng multi-application package-- SNP/Indel analysis, CNV prediction and...eBayes Description: finds SNPs, Indels, MNPs; reports variants base...: Manta Description: Calls indels and SVs from paired end read...command-line tool, supports SNPs, INDELs, CNVs and block substitution...2903 days ago
- ...e variability in sequence coverage across target regions. Homopolymer Uninterrupted stretch of a single nucleotide type (e.g., TTT or GGGGGG) InDel InDel stands for Insertion or delet...
2863 days ago
Quick next generation sequencing (NGS) terms definition
...genome by breaking into two sub-reads is called a split-read. These types of reads also indicate a potential SV or a short insertion or deletion (indel).read depth: number of r...2516 days ago
