Results for "Image data analysis"
Top-level pages
Bash Script source: https://gist.github.com/santhilalsubhash/367befcf5216be4b1fd9 Information: This sc...n.txt) Note: You can download GTF files from http://www.ensembl.org/info/data/ftp...2121 days ago
- alignment: the mapping of a raw seq...ressed format for storing VCF data. CIGAR String: Compact Idios...rmat for storing raw sequence data. For example, the FASTA file...des multiple elements of meta-data regarding a read and its alig...niques of nucleotide sequence analysis that increase the range, comp...
2883 days ago
Genome Assembly Tools and Software - PART1 !!
The genome assemblers generally tak...ory saving and convenience of data inquiry, high-throughput short reads data is always initially formatted...embly accuracy for downstream analysis. It combines the information...ide Assembler for Metagenomic Data SFA-SPA is a suffix array base...2700 days ago
Source Code and Pseudo Code !!
An algorithm is a procedure for solving a problem in terms of the actions to be execut...endif 5. Larger example: NOTE: NEVER ANY DATA DECLARATIONS IN PSEUDOCODE...iscussed ahead) in your pseudocode. Do not include data dec...2673 days ago
Quick next generation sequencing (NGS) terms definition
fragment size: the Illumina WGS protocol generates paired-end reads from both ends of longer fragments. The...erefore the fragment size distribution can be learned empirically for each WGS data set...2536 days ago
Awesome perl frameworks, libraries and software - PART 1
...;- a tool for backing up your data using rsync (if you want to ge...nbsp;- Perl binding for Redis database pplu/aws-sdk-perl -...eration Sequencing (NGS) data analysis masukomi/jsonpath-perl ...or High Throughput Sequencing analysis gbarr/perl-libnet - per...2504 days ago
- It is often necessary to import sample textbook data into R before you start worki...system. > library(gdata) ...k = loadWorkbook("mydata.xls") > df ...ocumentation > mydata = read.spss("myfile...
2503 days ago
Phylogenetic & Molecular Genetics Terms and Definitions
...m, resulting from a cladistic analysis, which depicts a hypothet...and (by reference to sequence data banks) for discovery of identitie...s. ingroup -- In a cladistic analysis, the set of taxa which are hy...haracters used in a cladistic analysis, either original or derived....2476 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
kallisto Transcript abundanc...aplogroup classifier from NGS data (k-mer based) Software (Pyth...from unassembled raw sequence data from whole genome sequencing...ing SNPs (based on k-mer analysis) Software (C) https://sourc...omic assignment in metagenome analysis by exact k-mer search; L...2385 days ago
- When you have both Illumina and Nanopore data, then SPAdes remains a good o...equired for MDA (single-cell) data --meta this...quired for metagenomic sample data --rna this...bling Advanced options: --dataset <filename>...
2365 days ago
