Results for "Import"
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Public Databases for Bioinformatics !
...P # fork example in python: (for more detailed examples look at https://github.com/nboley/grit/ grit/lib/multiprocessing_utils.py) import os import time import random import...1132 days ago
- ...;software uses the Ensembl database project to import sequence and annotation infor...al eukaryotic species. A user can additionally import their own custom sequence and...by using custom 3D models. Ensembl-derived and imported sequences can be analyzed b...
2627 days ago
Generate interactive codon usage plots
Generate interactive codon usage plots as used at ensembl.lepbase.org. The input file format can be generated from an Ensembl database using the export_json.pl script from the easy-import pipeline. live demo2251 days ago
SeqMonk:A tool to visualise and analyse high throughput mapped sequence data
...ration sequence data but can in theory be used for any dataset which can be expressed as a series of genomic positions. It's main features are: Import of mapped data from mapped da...2056 days ago
ALE: Assembly Likelihood Estimator
Just import the assembly, bam and ALE scores. You can convert the .ale file to a set of .wig files with ale2wiggle.py and IGV can read those directly. Depending on your genome size you may want to convert the .wig files to the BigWig format.418 days ago
- ...ok/ Install pip install genomenotebook How to use Create a simple genome browser with a search bar. The sequence appears when zooming in. import genomenotebook as gn g=gn....
374 days ago
