Results for "In Silico Biology"
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SATSUMA : Highly sensitive whole-genome synteny alignments.
Satsuma is a whole-genome synteny alignment program. It takes two genomes, computes alignments, and then keeps only the parts that are orthologous, i.e. following the c...2927 days ago
- Tools for making blobplots or Taxon-Annotated-GC-Coverage...a QC step Blaxter Lab, Institute of Evolutionary Biology, University of Edinburgh Goa...nbsp;Frontiers in Bioinformatics and Computational Biology special issue : Quality asses...
2896 days ago
- statistical analysis and visulization of functional profiles for genes and gene clust...biological themes among gene clusters.” OMICS: A Journal of Integrative Biology, 16(5), pp. 284-287.Installat...
2893 days ago
- CSBB is a command line based bioinformatics suite to analyze biological data acquired...in background for specific modules. Major focus of CSBB is to allow users from biology and bioinformatics community,...
2880 days ago
- A probabilistic framework for structural variant discovery. Ryan M Layer, Colby Chia...4. "LUMPY: a Probabilistic Framework for Structural Variant Discovery." Genome Biology 15 (6): R84. doi:10.1186...
2823 days ago
OPERA : Optimal Paired-End Read Assembler
OPERA (Optimal Paired-End Read Assembler) is a sequence assembly program (http://en.w...uscript describing the new features and algorithms is available at Genome Biology. We look forward to getting y...2808 days ago
CGView - Circular Genome Viewer
GView is a Java package used to display and navigate bacterial genomes. GView is useful for producing high-quality genome maps for use in publications and websites, or...2798 days ago
- Background: Transcriptomics, metabolomics, metagenomics, and other various next-gener...of large datasets. Visualizing such big data has posed technical challenges in biology, both in terms of available c...
2766 days ago
- Spines is a collection of software tools, developed and used by the Vertebrate Genome Biology Group at the Broad Institute....
2728 days ago
Understanding Greedy Algorithms
Learning greedy algo for biologist. https://www.topcoder.com/com...gdon/ps/conference/super_biokdd.pdf https://ocw.mit.edu/courses/biology/7-91j-foundations-of-computational-and-systems-biology-spring-2014/lecture-slides/MI...2714 days ago
