Results for "Javascript; Database: MySQL; Microarray data Analysis; Comparative Genomics; NGS; Proteomics; Molecular Phylogenetics; Teaching"
Bio-Scripts
set -e echo "Running reapr version 1.0.18 pipeline:" echo "/home/u...-n 25 WadinetaGapFilled.gapfilled.iteration1.fa /home/urbe/DATA/OriginalR...ha.160226.HiSeq2000.FCB.lane1.gcap_dev.R1.fastq /home/urbe/DATA/Ori...2108 days ago
Perl script to find palindromic pattern !
#!/usr/bin/perl use strict; use warnings; use strict; my %invert; @invert{ qw[ A C G T ] } = qw[ T G...als), substr( $in, $p1-$pals, ($pals+1)*2 ), $p1-$pals; } } __DATA__...2108 days ago
- jitendra@jitendra-UNLOCK-INSTALL[SNP] wget https://github.com/broadinst...run using Google cloud dataproc...germline samples given counts data G...equencing quality related and comparati...Checks that all data in the in...concordance between genotype data of...
2085 days ago
- ➜ upgrade_oh_my_zsh Updating Oh My Zsh remote: Counting objects: 484, done. remote: Compressing...gins/emoji/README.md | 6 +- plugins/emoji/emoji-data.txt...
2084 days ago
Installing pb-assembly on Linux !
[jnarayan@hmem00 ~]$ module avail ------------------------------...onda install -c bioconda pb-assembly Fetching package metadata ............narayan@hmem00 ~]$ conda install bwa Fetching package metadata ......2044 days ago
- (denovo_asm) [jnarayan@hmem00 ~]$ git clone https://github.com/cdunn2001/git-sym.git fatal: desti...s/git-sym.makefile 'greg200k-sv2.2' curl -L https://downloads.pacbcloud.com/public/data/git...
2043 days ago
Installing Platypus on Ubuntu !
(py27) ➜ Tools git:(master) ✗ git clone https://github.com/andyrimmer/Platypus.git...(Reading database...2028 days ago
- $ sudo apt-get install rakudo [sudo] password for jit: Reading package lists... Done Building...Selecting previously unselected package libjs-angularjs. (Reading database...
1560 days ago
- #! /usr/bin/Rscript ## Collect arguments args
2013 days ago
CollectGcBiasMetrics.jar will generate a GC bias plot for each contig
samtools index aln-pe.mapped.sorted.bam for i in $(samtools view -H aln-pe.mapped.sorted.bam |...> aln-pe.mapped.sorted.$i.bam; java -Xmx2g -jar $(which CollectGcBiasMetrics.jar) R=data/Cdi...2013 days ago
