Results for "Lateral gene transfer PLOS"
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Horizontal gene transfer (HGT), the transfer of genetic material between organisms, is crucial for genetic innovation and the evoluti...orithms rely on a strong phylogenetic signal distinguishing the transferred sequence fro...The method confirms candidate transferred genes based on the co...2874 days ago
- Recent studies of the human genome have indicated that regulatory elements (...ch other via chromatin folding and affect gene expression levels. Genomic te...DNA regions, e.g., ChIA-PET and HiC, can generate..., 3) querying network components based on gene...
2869 days ago
- CSBB is a command line based bioinformatics suite to analyze biological data acquired through v...like performing upper-quantile normalization on expression data or convert genome wide gene...
2867 days ago
- The greengenes web application provides access to the 2011 version of the greengenes 16S rRNA gene sequence alignment for browsing,...ownloading. The data and tools presented by greengenes ca...uences. If you are an ARB user, you can use greengene...
2867 days ago
- Records in 4DGenome are compiled through comprehensive literature curation of experimentally-de...ly available in a standardized file format. Records can be queried by genomic regions, gene...
2862 days ago
- Bambus 2.0, the second generation Bambus scaffolder available as an open source package....us can directly use the output of MUMmer), physical mapping data, or information about gene...
2819 days ago
GeneValidator - Identify problems with predicted genes
GeneValidator helps in identifing problems with gene predictions and provide useful information extracted...used by biocurators and researchers who need accurate gene pre...GeneValidator on a few sequences, see our online Gene...2809 days ago
- In this exercise, a previously annotated gene will be used to measure the accuracy of different gene finding approaches. GRAIL, GENSCAN, geneid, FGENESH, GenomeScan, GrailEXP and G...cases. http://genome.crg.es/courses/Bioinformatics2003_gene...
2809 days ago
Method in Comparative genomics !!
We present methods for the automatic determination of genome corres...f orthologs for more than 90% of genes and intergenic regions acros...e the large number of duplicated genes in the yeast genome. The rem...identification of protein-coding genes ba...ot rely on previous knowledge of gene...2733 days ago
- Gene finding in eukaryotic genomes is notoriously difficult to automate. The task is to...f-the-art performance across a wide range of species. GeneMark-ET is a gene pre...ds in the prediction step. Complementary strengths of Gene...
1950 days ago
