Results for "Lateral gene transfer PLOS"
Top-level pages
Useful Publications and Websites for Deep Sequencing Data Analysis
Global overview papers Next generation quantitative genetics in plants. Jiménez...blisher Website Differential gene and transcript expression ana...sity species. Elshire et al., PLoS One 6(5):e19379, 2011. Full T...framework for analyzing next-generation DNA sequencing data. Mc...3773 days ago
List of bioinformatics open source projects/software.
Open source software is software that can be freely used, change...Prot KB(Swiss-Prot + TrEMBL), Gene Ontology (GO), UniRef (50,90,...and data integration system GenePattern http://www.broadinsti...rver Bioinformatics and phylogenetics webserver (NJ, PhyML, RAxML,...ewick viewer, Horizontal gene tran...3751 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
List of generic simulation software/tools/resource with brief de...ss/CDPOP CDPOP is a landscape genetics tool for simulating the emergence of spatial genetic structure in populations r...gram package for evolutionary genetics and genomics. http://eggl...ulates interactions among two genetic...3731 days ago
Perl one-liner for bioinformatician !!!
With the emergence of NGS technologies, and sequencing data most of the bioinformaticians m..., = " "; print map { int(rand($max-$min))+$min } 1..$n' #Generate....."z",”0”..”9”)[rand 36] } 1..8'#Gene...3622 days ago
Next generation sequencing in R or bioconductor environment
There are many R software and bioconductor packages for NGS data analysis, some of them are...to retrieve the sequences around peaks, obtain enriched Gene Ontology (GO) terms, find the nearest gene...3619 days ago
Commercial and public next-gen-seq (NGS) software
Integrated solutions CLCbio Genomics Workbench - de novo and ref...tool and produce others. NextGENe - de novo and reference assem...eq, DNA-Seq, DNA Methylation, Gene Expression, Exon, miRNA Expre...omas Wu and Colin Watanabe at Genentec. C/Perl for Unix. gnumap...ool REPuter, but is much more general,...3513 days ago
- Since few years miRNA has shown to play important role in therapeutic related research and also known to play vital role in controlling gene exp...quencing data : http://www.illumina.com/applications/epigene...
3490 days ago
Apps for Busy Bioinformatics Researchers !!!
DNAApp: DNAApp: for iPhone/iPad This is an iOS app that allows...ii.seqdatreader&hl=en BioGene:iPhone/iPad BioGene is an information tool for bi...er. Key Features: Look up genes by symbol or description. G...p3, .m4v, .doc, .ppt, .xls ) transfer files via open in, email, or...3535 days ago
- Pathway Analysis is usually performed with aim to enrich the genes with their functional inform...a particular set of expressed genes follow but also to disclose...lso relationships between the genes, their transcripts, and thei...20Analysis.pdf http://gettinggeneticsdone.blogspot.de/2012/03/p...
3490 days ago
Software packages for next gen sequence analysis
Integrated solutions * CLCbio Genomics Workbench - de novo and r...Integrated Solutions for Next Generation Sequencing data analysi...ool and produce others. * NextGENe - de novo and reference assem...omas Wu and Colin Watanabe at Genentec. C/Perl for Unix. * gnuma...ool REPuter, but is much more general,...3236 days ago
